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Introduction
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Using the tutorials
Installing SLIMS
SLIMS
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Adding Dilution Series Plates
Plate Reformating
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Adding Items To Quick Lists
cell types
concentration
document
form
dilution series protocols
location
order
people
platetype
assay protocol
role
Self-Organizing Maps
unit
vendors
Vocabulary
Results
Adding a project
Renaming A Project
Experiments
Add An Experiment
Delete An Experiment
Extend An Experiment
Tutorials
Adding Compounds and Batches
Adding Results to the Database
Making a dilution series plate
Browing the SMA (Spinal Muscular Atrophy) data

Installing SLIMS


The easiest platform on which to install SLIMS is Microsoft Windows.  For other platforms, the source code is available for download at the slims sourceforge page.

SLIMS has been tested on Microsoft Windows, Redhat Linux and Mac OS/X but is mainly tested on the Microsoft Windows platform.

We are busy creating an installable package for Mac OS/X that is currently in beta testing.  Please contact the SLIMS maintainer for the current progress of this package.

To install SLIMS on Microsoft Windows:

Download the SLIMS.exe package via the download link at http://slims.sourceforge.net/
Download the substructure editor jchempaint.exe package via the download link at http://slims.sourceforge.net/  For the substructure editor to work, The Java jvm (virtual machine) must be installed on your machine.  http://java.sun.com/
If desired, download the slims-tutorial.exe via the download link at http://slims.sourceforge.net/


To install SLIMS double click on the SLIMS.exe and follow the directions.
For the following packages to work, they must be installed in the directory in which SLIMS was installed.

To install the jchempaint package (which enables substructure searching and structure editing) double click on the jchempaint.exe file and follow the directions.
To install the tutorial databases, double click on the slims-tutorials.exe and follow the directions.

The first time that SLIMS is run, you will be asked for the location of the slims database.  At this point you can create your first database.  The default password is "slims" without the quotes.  You may change this when you log into SLIMS.

To run SLIMS either
1) double click on any SLIMS database (anything labeled *.slm or that has the SLIMS compound icon)
2) double click on the SLIMS icon on the desktop or in the SLIMS program group.  If a SLIMS database does not exist or cannot be found, you will be asked for the location of the SLIMS database.  You can also enter a new location to create the SLIMS database.



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